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  5. Azfi_s0327.g065256

Azfi_s0327.g065256 (WLIM1)


Aliases : WLIM1

Description : LIM-type transcription factor & original description: CDS=201-761


Gene families : OG0000440 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000440_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0327.g065256
Cluster HCCA: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
AT3G55770 No alias GATA type zinc finger transcription factor family protein 0.03 OrthoFinder output from all 47 species
Adi_g004397 WLIM1 LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g006630 WLIM1 LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20871 WLIM1 LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g38003 WLIM1 LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g34912 WLIM1 LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03720 WLIM1 LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g27678 WLIM1 LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c7_3100V3.1 Pp3c7_3100 GATA type zinc finger transcription factor family protein 0.01 OrthoFinder output from all 47 species
Solyc05g049870.3.1 Solyc05g049870 transcription factor (LIM) 0.02 OrthoFinder output from all 47 species
Tin_g06395 WLIM1 LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004486 methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity IEP HCCA
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP HCCA
CC GO:0005740 mitochondrial envelope IEP HCCA
CC GO:0005751 mitochondrial respiratory chain complex IV IEP HCCA
BP GO:0006123 mitochondrial electron transport, cytochrome c to oxygen IEP HCCA
BP GO:0009060 aerobic respiration IEP HCCA
BP GO:0015980 energy derivation by oxidation of organic compounds IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0019646 aerobic electron transport chain IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
CC GO:0031967 organelle envelope IEP HCCA
CC GO:0031975 envelope IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
CC GO:0045277 respiratory chain complex IV IEP HCCA
BP GO:0045333 cellular respiration IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
InterPro domains Description Start Stop
IPR001781 Znf_LIM 108 162
IPR001781 Znf_LIM 10 64
No external refs found!