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  5. Azfi_s0315.g064284

Azfi_s0315.g064284


Description : not classified & original description: CDS=310-1998


Gene families : OG0002269 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002269_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0315.g064284
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AT5G63490 No alias CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein 0.04 OrthoFinder output from all 47 species
Ceric.18G075300.1 Ceric.18G075300 not classified & original description: pacid=50622210... 0.03 OrthoFinder output from all 47 species
LOC_Os11g30350.1 LOC_Os11g30350 CBS domain-containing protein CBSCBSPB4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_189315g0010 No alias CBS domain-containing protein CBSCBSPB3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007281 No alias not classified & original description: CDS=1-1578 0.03 OrthoFinder output from all 47 species
Sam_g25136 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc12g032950.3.1 Solyc12g032950 CBS domain-containing protein CBSCBSPB3 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e021428_P001 Zm00001e021428 CBS domain-containing protein CBSCBSPB4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004107 chorismate synthase activity IEP HCCA
MF GO:0004819 glutamine-tRNA ligase activity IEP HCCA
BP GO:0006425 glutaminyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
InterPro domains Description Start Stop
IPR000644 CBS_dom 295 335
IPR000644 CBS_dom 67 113
IPR000644 CBS_dom 235 281
IPR000644 CBS_dom 127 172
IPR000270 PB1_dom 415 498
No external refs found!