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  5. Azfi_s0312.g064197

Azfi_s0312.g064197


Description : component *(uL4) of large ribosomal-subunit (LSU) proteome & original description: CDS=1-1437


Gene families : OG0002398 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002398_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0312.g064197

Target Alias Description ECC score Gene Family Method Actions
Ehy_g05732 No alias component *(uL4) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Gb_00290 No alias component RPL4 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Ore_g24610 No alias component *(uL4) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g13131 No alias component *(uL4) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Solyc10g086010.2.1 Solyc10g086010 component RPL4 of LSU proteome component 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
MF GO:0043138 3'-5' DNA helicase activity IEP HCCA
MF GO:0070403 NAD+ binding IEP HCCA
InterPro domains Description Start Stop
IPR025755 Ribos_L4_C_dom 350 422
IPR002136 Ribosomal_L4/L1e 98 336
No external refs found!