Azfi_s0310.g064146


Description : cohesin cofactor *(PDS5) & original description: CDS=585-5357


Gene families : OG0000616 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000616_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0310.g064146

Target Alias Description ECC score Gene Family Method Actions
AT4G31880 No alias LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 24 plant... 0.03 OrthoFinder output from all 47 species
Ala_g11522 No alias cohesin cofactor *(PDS5) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g20243 No alias cohesin cofactor *(PDS5) & original description: none 0.05 OrthoFinder output from all 47 species
Als_g03900 No alias cohesin cofactor *(PDS5) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene00716.t1 Aspi01Gene00716 cohesin cofactor *(PDS5) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g04527 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.11G037000.1 Ceric.11G037000 cohesin cofactor *(PDS5) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.34G009800.1 Ceric.34G009800 cohesin cofactor *(PDS5) & original description:... 0.05 OrthoFinder output from all 47 species
Dac_g29223 No alias cohesin cofactor *(PDS5) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008876001 No alias Cell cycle.mitosis and meiosis.sister chromatid... 0.03 OrthoFinder output from all 47 species
GSVIVT01035890001 No alias Cell cycle.mitosis and meiosis.sister chromatid... 0.03 OrthoFinder output from all 47 species
Gb_23673 No alias cohesin cofactor (PDS5) 0.03 OrthoFinder output from all 47 species
LOC_Os06g17840.1 LOC_Os06g17840 cohesin cofactor (PDS5) 0.03 OrthoFinder output from all 47 species
Len_g21353 No alias cohesin cofactor *(PDS5) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g21968 No alias cohesin cofactor *(PDS5) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g46602 No alias cohesin cofactor *(PDS5) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g09667 No alias cohesin cofactor *(PDS5) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10426926g0010 No alias cohesin cofactor (PDS5) 0.03 OrthoFinder output from all 47 species
MA_10434055g0010 No alias cohesin cofactor (PDS5) 0.03 OrthoFinder output from all 47 species
MA_10434588g0010 No alias cohesin cofactor (PDS5) 0.03 OrthoFinder output from all 47 species
MA_815998g0010 No alias cohesin cofactor (PDS5) 0.04 OrthoFinder output from all 47 species
Msp_g25546 No alias cohesin cofactor *(PDS5) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g04827 No alias cohesin cofactor *(PDS5) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g40089 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g44286 No alias cohesin cofactor *(PDS5) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g57308 No alias cohesin cofactor *(PDS5) & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0038.g011973 No alias cohesin cofactor *(PDS5) & original description: CDS=154-4911 0.04 OrthoFinder output from all 47 species
Solyc06g065710.3.1 Solyc06g065710 cohesin cofactor (PDS5) 0.02 OrthoFinder output from all 47 species
Solyc11g012770.2.1 Solyc11g012770 cohesin cofactor (PDS5) 0.04 OrthoFinder output from all 47 species
Tin_g11324 No alias cohesin cofactor *(PDS5) & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e030989_P001 Zm00001e030989 cohesin cofactor (PDS5) 0.03 OrthoFinder output from all 47 species
Zm00001e036853_P003 Zm00001e036853 cohesin cofactor (PDS5) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!