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  5. Azfi_s0307.g063993

Azfi_s0307.g063993 (AtRABG3d, RABG3d)


Aliases : AtRABG3d, RABG3d

Description : G-class RAB GTPase & original description: CDS=107-727


Gene families : OG0000865 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000865_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0307.g063993

Target Alias Description ECC score Gene Family Method Actions
Adi_g052881 AtRABG3d, RABG3d G-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.20G031900.1 ATRAB7B, RAB7B,... G-class RAB GTPase & original description:... 0.05 OrthoFinder output from all 47 species
Cre06.g311900 ATRAB7, RABG3E, ATRABG3E Vesicle trafficking.regulation of membrane tethering and... 0.02 OrthoFinder output from all 47 species
Dcu_g14494 ATRABG3C, ATRAB7D, RABG3c G-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g47846 AtRABG3d, RABG3d G-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07308 ATRABG3C, ATRAB7D, RABG3c G-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01031953001 ATRAB7B, RAB7B,... Vesicle trafficking.regulation of membrane tethering and... 0.04 OrthoFinder output from all 47 species
LOC_Os01g51700.1 ATRABG3B,... G-class RAB GTPase 0.03 OrthoFinder output from all 47 species
Mp8g13820.1 AtRABG3d, RABG3d G-class RAB GTPase 0.06 OrthoFinder output from all 47 species
Pir_g40856 AtRABG3d, RABG3d G-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g00597 AtRABG3d, RABG3d G-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g48536 No alias G-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g12567 ATRABG3C, ATRAB7D, RABG3c G-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006665 sphingolipid metabolic process IEP HCCA
BP GO:0006672 ceramide metabolic process IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 10 177
No external refs found!