Azfi_s0303.g063784


Description : not classified & original description: CDS=1-1617


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0303.g063784
Cluster HCCA: Cluster_245

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00439p00011030 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g04780,... 0.05 OrthoFinder output from all 47 species
AT4G25270 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g07273 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g30899 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g27208 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene04185.t1 Aspi01Gene04185 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14838.t1 Aspi01Gene14838 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene20357.t1 Aspi01Gene20357 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0040.g026593 CRR22 not classified & original description: CDS=1-1842 0.03 OrthoFinder output from all 47 species
Azfi_s0049.g030697 No alias not classified & original description: CDS=1-2361 0.07 OrthoFinder output from all 47 species
Azfi_s4087.g117953 CRR22 not classified & original description: CDS=1-597 0.04 OrthoFinder output from all 47 species
Ceric.11G009800.1 Ceric.11G009800 not classified & original description: pacid=50594985... 0.05 OrthoFinder output from all 47 species
Ceric.21G051400.1 VAC1, ECB2,... not classified & original description: pacid=50603510... 0.05 OrthoFinder output from all 47 species
Ceric.28G059600.1 OTP84, Ceric.28G059600 not classified & original description: pacid=50569965... 0.05 OrthoFinder output from all 47 species
Ceric.29G082000.1 Ceric.29G082000 not classified & original description: pacid=50625862... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000342.38 No alias Pentatricopeptide repeat-containing protein At5g02860... 0.01 OrthoFinder output from all 47 species
Dac_g31659 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08493 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g15835 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01033348001 No alias Cellular respiration.oxidative phosphorylation.NADH... 0.02 OrthoFinder output from all 47 species
Len_g18279 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Lfl_g06676 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g14403 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g15845 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g38613 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g03998 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g08807 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g03108 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63497 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63881 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g002023 No alias not classified & original description: CDS=1-2592 0.05 OrthoFinder output from all 47 species
Sam_g16299 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g27517 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g42246 OTP84 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g04722 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04733 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10295 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g11066 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g14571 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g17632 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g20109 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g22992 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g23118 VAC1, ECB2, ATECB2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g23237 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g26898 EMB2758 ssDNA-binding protein *(OSB) & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g30218 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g41856 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 460 484
IPR002885 Pentatricopeptide_repeat 178 225
IPR002885 Pentatricopeptide_repeat 284 332
IPR002885 Pentatricopeptide_repeat 386 433
IPR002885 Pentatricopeptide_repeat 75 125
No external refs found!