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  5. Azfi_s0296.g063535

Azfi_s0296.g063535 (SDG2, ATXR3)


Aliases : SDG2, ATXR3

Description : class-III histone methyltransferase *(Trx) & original description: CDS=1-6225


Gene families : OG0002791 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002791_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0296.g063535
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00043p00149000 SDG2, ATXR3,... Chromatin organisation.histone modifications.histone... 0.04 OrthoFinder output from all 47 species
Aob_g28999 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.05 OrthoFinder output from all 47 species
Ceric.18G017200.1 SDG2, ATXR3,... class-III histone methyltransferase *(Trx) & original... 0.06 OrthoFinder output from all 47 species
Cre17.g742700 SDG2, ATXR3 Chromatin organisation.histone modifications.histone... 0.02 OrthoFinder output from all 47 species
Mp2g06500.1 SDG2, ATXR3 class III/Trithorax histone methyltransferase component... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0023.g008756 SDG2, ATXR3 class-III histone methyltransferase *(Trx) & original... 0.03 OrthoFinder output from all 47 species
Smo447947 SDG2, ATXR3 Chromatin organisation.histone modifications.histone... 0.02 OrthoFinder output from all 47 species
Zm00001e021659_P001 SDG2, ATXR3,... class III/Trithorax histone methyltransferase component... 0.03 OrthoFinder output from all 47 species
Zm00001e039942_P003 SDG2, ATXR3,... class III/Trithorax histone methyltransferase component... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004107 chorismate synthase activity IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0043022 ribosome binding IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
InterPro domains Description Start Stop
IPR045606 SDG2_C 1612 1967
IPR001214 SET_dom 1525 1600
IPR025640 GYF_2 847 891
No external refs found!