Solyc09g007200.3.1 (Solyc09g007200.3)


Aliases : Solyc09g007200.3

Description : 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0007897 (Gene family) Phylogenetic Tree(s): OG0007897_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc09g007200.3.1
Cluster HCCA cluster: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
AT5G02830 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.11 Gene family
GSVIVT01025541001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.08 Gene family
LOC_Os03g17634 Os03g0284900 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Zm00001d047759 GRMZM2G092123,... 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 595 652
IPR002885 Pentatricopeptide_repeat 542 585
IPR002885 Pentatricopeptide_repeat 311 360
IPR002885 Pentatricopeptide_repeat 422 469
IPR002885 Pentatricopeptide_repeat 390 420
No external refs found!