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  5. Azfi_s0279.g062250

Azfi_s0279.g062250 (CLPR4)


Aliases : CLPR4

Description : non-proteolytic core component *(ClpR) of chloroplast Clp-type protease complex & original description: CDS=130-1053


Gene families : OG0000988 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000988_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0279.g062250

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00207040 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.serine-type... 0.03 OrthoFinder output from all 47 species
AMTR_s00164p00068000 CLPR1, SVR2,... Protein degradation.peptidase families.serine-type... 0.04 OrthoFinder output from all 47 species
Adi_g019566 No alias non-proteolytic core component *(ClpR) of chloroplast... 0.04 OrthoFinder output from all 47 species
Adi_g074670 CLPR1, SVR2, NCLPP5 non-proteolytic core component *(ClpR) of chloroplast... 0.06 OrthoFinder output from all 47 species
Ala_g09550 CLPR1, SVR2, NCLPP5 non-proteolytic core component *(ClpR) of chloroplast... 0.04 OrthoFinder output from all 47 species
Aob_g02995 CLPR1, SVR2, NCLPP5 non-proteolytic core component *(ClpR) of chloroplast... 0.03 OrthoFinder output from all 47 species
Cba_g15422 No alias non-proteolytic core component *(ClpR) of chloroplast... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020952.49 CLPR4 Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder output from all 47 species
Dac_g03150 CLPR4 non-proteolytic core component *(ClpR) of chloroplast... 0.03 OrthoFinder output from all 47 species
Dcu_g02591 CLPR4 non-proteolytic core component *(ClpR) of chloroplast... 0.06 OrthoFinder output from all 47 species
Dde_g02711 CLPR1, SVR2, NCLPP5 non-proteolytic core component *(ClpR) of chloroplast... 0.03 OrthoFinder output from all 47 species
Dde_g03225 CLPR4 non-proteolytic core component *(ClpR) of chloroplast... 0.03 OrthoFinder output from all 47 species
Ehy_g02196 No alias non-proteolytic core component *(ClpR) of chloroplast... 0.02 OrthoFinder output from all 47 species
LOC_Os05g51450.1 CLPR1, SVR2,... non-proteolytic core component ClpR of chloroplast... 0.03 OrthoFinder output from all 47 species
Lfl_g01084 CLPR4 non-proteolytic core component *(ClpR) of chloroplast... 0.03 OrthoFinder output from all 47 species
Ore_g07323 CLPR1, SVR2, NCLPP5 non-proteolytic core component *(ClpR) of chloroplast... 0.04 OrthoFinder output from all 47 species
Solyc01g099690.3.1 Solyc01g099690 non-proteolytic core component ClpR of chloroplast... 0.05 OrthoFinder output from all 47 species
Spa_g12805 CLPR4 non-proteolytic core component *(ClpR) of chloroplast... 0.06 OrthoFinder output from all 47 species
Spa_g22875 CLPR4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e017288_P001 CLPR4, Zm00001e017288 non-proteolytic core component ClpR of chloroplast... 0.07 OrthoFinder output from all 47 species
Zm00001e032571_P001 CLPR1, SVR2,... non-proteolytic core component ClpR of chloroplast... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0032977 membrane insertase activity IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA
InterPro domains Description Start Stop
IPR023562 ClpP/TepA 123 300
No external refs found!