Ehy_g04548 (EIF4A-2)

Aliases : EIF4A-2

Description : mRNA unwinding factor *(eIF4A)) & original description: none

Gene families : OG0000532 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000532_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ehy_g04548

Target	Alias	Description	ECC score	Gene Family Method
Als_g40134	EIF4A-III	helicase component *(eIF4A3) of RNA quality control Exon...	0.02	OrthoFinder output from all 47 species
Aop_g03155	EIF4A-III	helicase component *(eIF4A3) of RNA quality control Exon...	0.02	OrthoFinder output from all 47 species
Cba_g75441	EIF4A-2	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Mp2g02760.1	EIF4A-2	mRNA unwinding factor (eIF4A)	0.02	OrthoFinder output from all 47 species
Mp4g09540.1	EIF4A-III	helicase component eIF4A3 of RNA quality control Exon...	0.02	OrthoFinder output from all 47 species
Ppi_g33417	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Solyc08g062800.3.1	EIF4A-2, Solyc08g062800	mRNA unwinding factor (eIF4A)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR011545	DEAD/DEAH_box_helicase_dom	66	227
IPR001650	Helicase_C	267	375

External Links

No external refs found!