AMTR_s00146p00068870 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00146.41

Description : UBP1-associated proteins 1C OS=Arabidopsis thaliana


Gene families : OG_01_0005965 (Archaeplastida) Phylogenetic Tree(s): OG_01_0005965_tree ,
OG_02_0007745 (LandPlants) Phylogenetic Tree(s): OG_02_0007745_tree ,
OG_03_0008977 (SeedPlants) Phylogenetic Tree(s): OG_03_0008977_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00146p00068870
Cluster HCCA: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000383.21 No alias No description available 0.02 Archaeplastida
LOC_Os01g40110.1 No alias UBP1-associated proteins 1C OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_10435781g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c3_280V3.1 No alias zinc ion binding 0.04 Archaeplastida
Solyc07g041020.3.1 No alias UBP1-associated proteins 1C OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_25299 No alias UBP1-associated proteins 1C OS=Arabidopsis thaliana... 0.02 LandPlants
LOC_Os01g40110.1 No alias UBP1-associated proteins 1C OS=Arabidopsis thaliana... 0.05 LandPlants
Pp3c3_280V3.1 No alias zinc ion binding 0.04 LandPlants
Solyc07g041020.3.1 No alias UBP1-associated proteins 1C OS=Arabidopsis thaliana... 0.04 LandPlants
LOC_Os01g40110.1 No alias UBP1-associated proteins 1C OS=Arabidopsis thaliana... 0.05 SeedPlants
Solyc07g041020.3.1 No alias UBP1-associated proteins 1C OS=Arabidopsis thaliana... 0.04 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR014898 Znf_C2H2_LYAR 30 57
No external refs found!