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  5. Azfi_s0268.g061095

Azfi_s0268.g061095 (PRA1.A1)


Aliases : PRA1.A1

Description : A-class Rab-GDF protein & original description: CDS=195-893


Gene families : OG0002691 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002691_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0268.g061095
Cluster HCCA: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
Adi_g016872 PRA1.A1 A-class Rab-GDF protein & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g08707 PRA1.A1 A-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04770 PRA1.A1 A-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species
Cre06.g267900 PRA1.A3 Vesicle trafficking.regulation of membrane tethering and... 0.04 OrthoFinder output from all 47 species
LOC_Os05g38160.1 PRA1.A1, LOC_Os05g38160 A-class Rab-GDF protein 0.04 OrthoFinder output from all 47 species
Len_g00380 PRA1.A1 A-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000813 ESCRT I complex IEP HCCA
MF GO:0003993 acid phosphatase activity IEP HCCA
MF GO:0004057 arginyltransferase activity IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
BP GO:0016598 protein arginylation IEP HCCA
MF GO:0016755 aminoacyltransferase activity IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
CC GO:0036452 ESCRT complex IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0071985 multivesicular body sorting pathway IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR004895 Prenylated_rab_accept_PRA1 20 215
No external refs found!