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  5. Azfi_s0247.g060108

Azfi_s0247.g060108 (RHS8)


Aliases : RHS8

Description : not classified & original description: CDS=1-984


Gene families : OG0000180 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000180_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0247.g060108

Target Alias Description ECC score Gene Family Method Actions
AT2G32750 No alias Exostosin family protein 0.03 OrthoFinder output from all 47 species
Azfi_s0004.g008340 GT18, ATGT18 galactosyltransferase *(XLT2) & original description: CDS=1-1620 0.05 OrthoFinder output from all 47 species
Azfi_s0149.g053163 GT18, ATGT18 galactosyltransferase *(XLT2) & original description: CDS=1-1587 0.05 OrthoFinder output from all 47 species
Ehy_g05961 RHS8 galacturonosyltransferase *(XUT1) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc08g079040.1.1 Solyc08g079040 Probable xyloglucan galactosyltransferase GT19... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR040911 Exostosin_GT47 101 257
IPR040911 Exostosin_GT47 23 98
No external refs found!