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  5. Azfi_s0246.g060041

Azfi_s0246.g060041


Description : PLATZ-type transcription factor & original description: CDS=1-1245


Gene families : OG0000228 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000228_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0246.g060041
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00166000 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PLATZ... 0.03 OrthoFinder output from all 47 species
Aev_g03897 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g12654 No alias PLATZ-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene21595.t1 Aspi01Gene21595 PLATZ-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene34065.t1 Aspi01Gene34065 PLATZ-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene52963.t1 Aspi01Gene52963 PLATZ-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g13638 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G009800.1 Ceric.01G009800 PLATZ-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.02G063700.1 Ceric.02G063700 PLATZ-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.24G040000.1 Ceric.24G040000 PLATZ-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.39G029500.1 Ceric.39G029500 PLATZ-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ehy_g04318 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01004782001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.03 OrthoFinder output from all 47 species
GSVIVT01012125001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.03 OrthoFinder output from all 47 species
GSVIVT01012869001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.04 OrthoFinder output from all 47 species
GSVIVT01031446001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.04 OrthoFinder output from all 47 species
GSVIVT01031929001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.02 OrthoFinder output from all 47 species
Gb_39126 No alias transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
LOC_Os09g02790.1 LOC_Os09g02790 transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
LOC_Os09g03080.1 LOC_Os09g03080 transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
LOC_Os10g42410.3 LOC_Os10g42410 transcription factor (PLATZ) 0.04 OrthoFinder output from all 47 species
Ore_g04893 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g20268 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g40712 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g41201 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g12568 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g24743 No alias PLATZ-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g25448 No alias PLATZ-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g27584 No alias PLATZ-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g10046 No alias PLATZ-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g63891 No alias PLATZ-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0110.g020601 No alias PLATZ-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0194.g025441 No alias not classified & original description: CDS=1-1005 0.05 OrthoFinder output from all 47 species
Sam_g24805 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g26003 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g032555.1.1 Solyc02g032555 transcription factor (PLATZ) 0.02 OrthoFinder output from all 47 species
Solyc08g005100.3.1 Solyc08g005100 transcription factor (PLATZ) 0.02 OrthoFinder output from all 47 species
Solyc08g076860.3.1 Solyc08g076860 transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
Spa_g29503 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e013865_P001 Zm00001e013865 transcription factor (PLATZ) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004470 malic enzyme activity IEP HCCA
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP HCCA
MF GO:0005384 manganese ion transmembrane transporter activity IEP HCCA
BP GO:0006873 cellular monoatomic ion homeostasis IEP HCCA
BP GO:0006875 cellular metal ion homeostasis IEP HCCA
MF GO:0016615 malate dehydrogenase activity IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
BP GO:0030003 cellular monoatomic cation homeostasis IEP HCCA
BP GO:0030026 cellular manganese ion homeostasis IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
BP GO:0046916 cellular transition metal ion homeostasis IEP HCCA
BP GO:0048878 chemical homeostasis IEP HCCA
BP GO:0050801 monoatomic ion homeostasis IEP HCCA
BP GO:0055065 metal ion homeostasis IEP HCCA
BP GO:0055071 manganese ion homeostasis IEP HCCA
BP GO:0055076 transition metal ion homeostasis IEP HCCA
BP GO:0055080 monoatomic cation homeostasis IEP HCCA
BP GO:0055082 cellular chemical homeostasis IEP HCCA
BP GO:0098771 inorganic ion homeostasis IEP HCCA
InterPro domains Description Start Stop
IPR006734 PLATZ 102 217
No external refs found!