Azfi_s0237.g059606


Description : not classified & original description: CDS=1-2121


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0237.g059606

Target Alias Description ECC score Gene Family Method Actions
AT1G31010 OSB4 organellar single-stranded DNA binding protein 4 0.02 OrthoFinder output from all 47 species
Adi_g060792 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g081057 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g04237 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12498 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g16821 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24222 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g24393 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24403 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g30892 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g30900 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g32891 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g35854 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g05739 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g15903 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14821.t1 CRR2, Aspi01Gene14821 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07168 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g34773 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.04G078900.1 Ceric.04G078900 not classified & original description: pacid=50631863... 0.03 OrthoFinder output from all 47 species
Ceric.13G015700.1 Ceric.13G015700 not classified & original description: pacid=50636078... 0.05 OrthoFinder output from all 47 species
Ceric.13G050400.1 Ceric.13G050400 not classified & original description: pacid=50636404... 0.03 OrthoFinder output from all 47 species
Ceric.15G015100.1 CRR22, Ceric.15G015100 not classified & original description: pacid=50640379... 0.03 OrthoFinder output from all 47 species
Ceric.17G033700.1 VAC1, ECB2,... not classified & original description: pacid=50617387... 0.05 OrthoFinder output from all 47 species
Ceric.17G054900.1 DOT4, Ceric.17G054900 not classified & original description: pacid=50617812... 0.03 OrthoFinder output from all 47 species
Ceric.17G073400.1 OTP86, Ceric.17G073400 not classified & original description: pacid=50617570... 0.06 OrthoFinder output from all 47 species
Ceric.18G023200.1 Ceric.18G023200 not classified & original description: pacid=50622130... 0.08 OrthoFinder output from all 47 species
Ceric.21G042400.1 Ceric.21G042400 not classified & original description: pacid=50602832... 0.04 OrthoFinder output from all 47 species
Ceric.28G068300.1 DOT4, Ceric.28G068300 not classified & original description: pacid=50570176... 0.03 OrthoFinder output from all 47 species
Ceric.30G007900.1 Ceric.30G007900 not classified & original description: pacid=50608292... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001657.6 No alias No description available 0.01 OrthoFinder output from all 47 species
Dcu_g16645 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g50046 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g38992 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
GSVIVT01035837001 LPA66 Pentatricopeptide repeat-containing protein At4g21065... 0.05 OrthoFinder output from all 47 species
Gb_28758 OTP84 Pentatricopeptide repeat-containing protein At1g11290,... 0.06 OrthoFinder output from all 47 species
Len_g05333 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g15615 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g33724 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g01185 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g14419 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g28213 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Msp_g28224 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g28538 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Msp_g32360 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Msp_g33329 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g34215 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g44115 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g46086 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g47203 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g10800 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g13362 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13487 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g23739 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Nbi_g38541 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g13521 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63652 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63895 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g05183 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06960 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g31070 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g36018 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g39723 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53939 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g54829 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56081 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g57742 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g006801 EMB2261 not classified & original description: CDS=90-2282 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0049.g013695 No alias not classified & original description: CDS=1-2949 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0124.g021578 MEF19 not classified & original description: CDS=1-1950 0.04 OrthoFinder output from all 47 species
Sam_g11781 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g35987 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g48011 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g15467 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g20468 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g27905 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g07079 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g13479 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g22900 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g23388 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g26504 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e029119_P001 Zm00001e029119 Pentatricopeptide repeat-containing protein At2g33760... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 536 584
IPR002885 Pentatricopeptide_repeat 130 177
IPR002885 Pentatricopeptide_repeat 234 281
IPR002885 Pentatricopeptide_repeat 335 383
IPR002885 Pentatricopeptide_repeat 511 533
IPR002885 Pentatricopeptide_repeat 310 331
IPR002885 Pentatricopeptide_repeat 410 432
IPR002885 Pentatricopeptide_repeat 439 468
IPR002885 Pentatricopeptide_repeat 617 640
IPR046848 E_motif 660 700
No external refs found!