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  5. Azfi_s0233.g059433

Azfi_s0233.g059433 (ATCUL4, CUL4)


Aliases : ATCUL4, CUL4

Description : scaffold component *(CUL4) of CUL4-DDB1 ubiquitination complexes & original description: CDS=652-3054


Gene families : OG0000920 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000920_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0233.g059433

Target Alias Description ECC score Gene Family Method Actions
AT5G46210 ATCUL4, CUL4 cullin4 0.04 OrthoFinder output from all 47 species
Adi_g009657 ATCUL3A, ATCUL3,... scaffold component *(CUL3) of CUL3-BTB E3 ligase... 0.03 OrthoFinder output from all 47 species
Adi_g058112 ATCUL4, CUL4 scaffold component *(CUL4) of CUL4-DDB1 ubiquitination... 0.03 OrthoFinder output from all 47 species
Ala_g06366 ATCUL3A, ATCUL3,... scaffold component *(CUL3) of CUL3-BTB E3 ligase... 0.03 OrthoFinder output from all 47 species
Als_g06802 ATCUL4, CUL4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g08433 ATCUL3A, ATCUL3,... scaffold component *(CUL3) of CUL3-BTB E3 ligase... 0.02 OrthoFinder output from all 47 species
Aop_g07404 ATCUL3A, ATCUL3,... scaffold component *(CUL3) of CUL3-BTB E3 ligase... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020934.33 CUL3B, ATCUL3B Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
GSVIVT01020008001 ATCUL3A, ATCUL3,... Cullin-3A OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Len_g07971 ATCUL4, CUL4 scaffold component *(CUL4) of CUL4-DDB1 ubiquitination... 0.03 OrthoFinder output from all 47 species
Ore_g17472 ATCUL4, CUL4 scaffold component *(CUL4) of CUL4-DDB1 ubiquitination... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0051.g013899 ATCUL3A, ATCUL3,... scaffold component *(CUL3) of CUL3-BTB E3 ligase... 0.04 OrthoFinder output from all 47 species
Zm00001e005919_P001 ATCUL4, CUL4,... scaffold component CUL4 of CUL4-DDB1 ubiquitination... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
MF GO:0031625 ubiquitin protein ligase binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008569 minus-end-directed microtubule motor activity IEP HCCA
CC GO:0030286 dynein complex IEP HCCA
InterPro domains Description Start Stop
IPR019559 Cullin_neddylation_domain 732 792
IPR001373 Cullin_N 131 722
No external refs found!