Azfi_s0233.g059427

Description : component *(NRPC13/RPC82) of TFIIIe transcription factor module & original description: CDS=34-1863

Gene families : OG0003612 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003612_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Azfi_s0233.g059427

Target	Alias	Description	ECC score	Gene Family Method
AT3G49000	No alias	RNA polymerase III subunit RPC82 family protein	0.05	OrthoFinder output from all 47 species
Ceric.14G093600.1	Ceric.14G093600	component *(NRPC13/RPC82) of TFIIIe transcription factor...	0.03	OrthoFinder output from all 47 species
Cre16.g673900	No alias	RNA biosynthesis.RNA polymerase III-dependent...	0.02	OrthoFinder output from all 47 species
Len_g02345	No alias	component *(NRPC13/RPC82) of TFIIIe transcription factor...	0.04	OrthoFinder output from all 47 species
Mp5g03850.1	No alias	component RPC82 of TFIIIe transcription factor complex	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006351	DNA-templated transcription	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0032774	RNA biosynthetic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0097659	nucleic acid-templated transcription	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004611	phosphoenolpyruvate carboxykinase activity	IEP	HCCA
MF	GO:0005509	calcium ion binding	IEP	HCCA
BP	GO:0006099	tricarboxylic acid cycle	IEP	HCCA
MF	GO:0008964	phosphoenolpyruvate carboxylase activity	IEP	HCCA
BP	GO:0009719	response to endogenous stimulus	IEP	HCCA
BP	GO:0009725	response to hormone	IEP	HCCA
BP	GO:0010033	response to organic substance	IEP	HCCA
BP	GO:0015977	carbon fixation	IEP	HCCA
MF	GO:0016830	carbon-carbon lyase activity	IEP	HCCA
MF	GO:0016831	carboxy-lyase activity	IEP	HCCA
BP	GO:0042221	response to chemical	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR008806	RNA_pol_III_Rpc82_C	175	397
IPR013197	RNA_pol_III_RPC82-rel_HTH	9	67

External Links

No external refs found!

Azfi_s0233.g059427

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation