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  5. Azfi_s0232.g059342

Azfi_s0232.g059342 (CPSF30, ATCPSF30)


Aliases : CPSF30, ATCPSF30

Description : component *(CPSF30/Yth1) of Cleavage and Polyadenylation Specificity Factor (CPSF) complex & original description: CDS=779-2986


Gene families : OG0003202 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003202_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0232.g059342
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00155p00079840 CPSF30,... RNA processing.RNA 3-end polyadenylation.Cleavage and... 0.02 OrthoFinder output from all 47 species
Aob_g28233 CPSF30, ATCPSF30 component *(CPSF30/Yth1) of Cleavage and Polyadenylation... 0.03 OrthoFinder output from all 47 species
Cba_g03380 CPSF30, ATCPSF30 component *(CPSF30/Yth1) of Cleavage and Polyadenylation... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
InterPro domains Description Start Stop
IPR007275 YTH_domain 289 351
IPR007275 YTH_domain 368 423
No external refs found!