Azfi_s0232.g059284 (PGP13)

Aliases : PGP13

Description : subfamily ABCB transporter & original description: CDS=307-4314

Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Azfi_s0232.g059284

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00254310	ABCB19,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
AMTR_s00017p00164980	ATPGP4, PGP4,...	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species
AMTR_s00048p00046670	PGP2,...	Solute transport.primary active transport.ABC...	0.05	OrthoFinder output from all 47 species
AMTR_s00055p00102180	ABCB14,...	Solute transport.primary active transport.ABC...	0.06	OrthoFinder output from all 47 species
AMTR_s00056p00132920	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
AMTR_s00090p00165440	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species
AT4G25960	PGP2	P-glycoprotein 2	0.05	OrthoFinder output from all 47 species
AT5G46540	PGP7	P-glycoprotein 7	0.03	OrthoFinder output from all 47 species
Adi_g010407	PGP2	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g025752	ABCB19,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g058585	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g067518	PGP1, ABCB1, ATPGP1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g087061	ABCB19,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g20043	ABCB19,...	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g24244	ABCB19,...	subfamily ABCB transporter & original description: none	0.06	OrthoFinder output from all 47 species
Ala_g25151	PGP2	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g36024	ABCB19,...	subfamily ABCB transporter & original description: none	0.05	OrthoFinder output from all 47 species
Als_g05763	ABCB19,...	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Als_g09585	PGP10	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Als_g14091	ATPGP4, PGP4, ABCB4, MDR4	subfamily ABCB transporter & original description: none	0.06	OrthoFinder output from all 47 species
Als_g14092	PGP21	subfamily ABCB transporter & original description: none	0.05	OrthoFinder output from all 47 species
Als_g18810	PGP2	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g16050	PGP2	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g14003	PGP2	subfamily ABCB transporter & original description: none	0.05	OrthoFinder output from all 47 species
Aop_g22258	PGP2	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g32929	ABCB19,...	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene43898.t1	PGP20, Aspi01Gene43898	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene45621.t1	PGP11, Aspi01Gene45621	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene52651.t1	PGP2, Aspi01Gene52651	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene62048.t2	PGP2, Aspi01Gene62048	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.35G032800.1	ABCB19,...	subfamily ABCB transporter & original description:...	0.05	OrthoFinder output from all 47 species
Ceric.38G058800.1	PGP2, Ceric.38G058800	subfamily ABCB transporter & original description:...	0.06	OrthoFinder output from all 47 species
Dac_g06724	PGP2	subfamily ABCB transporter & original description: none	0.06	OrthoFinder output from all 47 species
Dac_g06939	PGP13	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Dac_g12633	PGP2	subfamily ABCB transporter & original description: none	0.07	OrthoFinder output from all 47 species
Dac_g14063	PGP11	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g40237	ABCB19,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g03201	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g12428	PGP2	subfamily ABCB transporter & original description: none	0.05	OrthoFinder output from all 47 species
Dcu_g20621	PGP2	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g40826	PGP2	subfamily ABCB transporter & original description: none	0.06	OrthoFinder output from all 47 species
Dcu_g41879	ABCB19,...	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g30302	PGP2	subfamily ABCB transporter & original description: none	0.05	OrthoFinder output from all 47 species
Dde_g30303	PGP2	subfamily ABCB transporter & original description: none	0.07	OrthoFinder output from all 47 species
Dde_g46023	PGP13	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g46847	PGP11	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g17218	ABCB19,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01013125001	PGP2	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species
GSVIVT01033645001	PGP1, ABCB1, ATPGP1	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species
Gb_13906	PGP2	subfamily ABCB transporter	0.06	OrthoFinder output from all 47 species
Gb_13908	PGP10	ABC transporter B family member 10 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
LOC_Os02g46680.1	PGP2, LOC_Os02g46680	subfamily ABCB transporter	0.05	OrthoFinder output from all 47 species
LOC_Os04g38570.1	ABCB19,...	auxin efflux transporter (ABCB19)	0.03	OrthoFinder output from all 47 species
Len_g02924	PGP2	subfamily ABCB transporter & original description: none	0.05	OrthoFinder output from all 47 species
Len_g18141	PGP10	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Len_g19149	PGP2	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Len_g47394	PGP2	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Lfl_g08040	ABCB19,...	subfamily ABCB transporter & original description: none	0.05	OrthoFinder output from all 47 species
Lfl_g21852	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
MA_126766g0010	PGP2	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
MA_138894g0010	PGP11	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
MA_934204g0010	No alias	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Mp2g02910.1	ABCB19,...	auxin efflux transporter (ABCB19). subfamily ABCB transporter	0.04	OrthoFinder output from all 47 species
Mp2g06270.1	PGP20	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Mp2g11920.1	ABCB19,...	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Msp_g13353	PGP13	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g31505	PGP11	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g03862	ABCB19,...	subfamily ABCB transporter & original description: none	0.06	OrthoFinder output from all 47 species
Nbi_g19754	ABCB19,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g24809	PGP2	not classified & original description: none	0.09	OrthoFinder output from all 47 species
Nbi_g37290	PGP11	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g29224	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g29842	PGP10	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g35743	No alias	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g14316	PGP2	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g03284	PGP13	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g07008	ABCB14, ATABCB14, PGP14	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g17867	PGP11	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g60298	PGP2	subfamily ABCB transporter & original description: none	0.05	OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000035	PGP13	subfamily ABCB transporter & original description: CDS=555-4511	0.04	OrthoFinder output from all 47 species
Smo230688	ABCB19,...	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species
Smo408755	No alias	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
Solyc02g087870.3.1	ABCB19,...	auxin efflux transporter (ABCB19). subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Spa_g06203	PGP13	subfamily ABCB transporter & original description: none	0.06	OrthoFinder output from all 47 species
Spa_g09413	PGP2	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g47519	PGP2	subfamily ABCB transporter & original description: none	0.06	OrthoFinder output from all 47 species
Spa_g56665	ABCB19,...	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g06699	PGP2	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g31718	PGP2	subfamily ABCB transporter & original description: none	0.05	OrthoFinder output from all 47 species
Zm00001e023274_P001	PGP2, Zm00001e023274	subfamily ABCB transporter	0.05	OrthoFinder output from all 47 species
Zm00001e041008_P003	ABCB19,...	auxin efflux transporter (ABCB19). subfamily ABCB transporter	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140359	ABC-type transporter activity	IEA	Interproscan
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	IEP	HCCA
MF	GO:0050664	oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	459	607
IPR003439	ABC_transporter-like_ATP-bd	1104	1252
IPR011527	ABC1_TM_dom	116	389
IPR011527	ABC1_TM_dom	764	1035

External Links

No external refs found!

Azfi_s0232.g059284 (PGP13)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation