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  5. Azfi_s0226.g058986

Azfi_s0226.g058986


Description : not classified & original description: CDS=214-2052


Gene families : OG0001265 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001265_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0226.g058986

Target Alias Description ECC score Gene Family Method Actions
Adi_g083877 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g16104 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g13480 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G051600.1 Ceric.01G051600 not classified & original description: pacid=50592490... 0.03 OrthoFinder output from all 47 species
Ceric.25G014900.1 Ceric.25G014900 not classified & original description: pacid=50594354... 0.02 OrthoFinder output from all 47 species
Ceric.25G071400.1 Ceric.25G071400 not classified & original description: pacid=50593370... 0.04 OrthoFinder output from all 47 species
Dcu_g04880 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g15768 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g23949 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16481 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g06999 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27184 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e028338_P001 Zm00001e028338 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 472 527
IPR000504 RRM_dom 74 133
No external refs found!