Solyc08g082630.3.1 (Solyc08g082630.3)


Aliases : Solyc08g082630.3

Description : 27.3.4 RNA.regulation of transcription.ARF, Auxin Response Factor family Encodes auxin response factor 9 (ARF9). auxin response factor 9 (ARF9)


Gene families : OG_01_0000037 (Gene family) Phylogenetic Tree(s): OG0000037_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc08g082630.3.1
Cluster HCCA cluster: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AT1G19850 MP, IAA24, ARF5 Transcriptional factor B3 family protein /... 0.03 Gene family
AT2G33860 ARF3, ETT Transcriptional factor B3 family protein /... 0.02 Gene family
GSVIVT01011008001 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.05 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
CC GO:0005634 nucleus IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
BP GO:0009725 response to hormone IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 130 230
IPR010525 Auxin_resp 256 335
IPR033389 AUX/IAA_dom 555 601
IPR033389 AUX/IAA_dom 610 650
No external refs found!