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  5. Azfi_s0200.g057514

Azfi_s0200.g057514 (emb1629, APO2)


Aliases : emb1629, APO2

Description : organelle RNA splicing factor *(APO) & original description: CDS=171-1535


Gene families : OG0001840 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001840_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Azfi_s0200.g057514

Target Alias Description ECC score Gene Family Method Actions
Aop_g05432 emb1629, APO2 organelle RNA splicing factor *(APO) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g03932 emb1629, APO2 organelle RNA splicing factor *(APO) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g25543 APO1 organelle RNA splicing factor *(APO) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13449 APO1 organelle RNA splicing factor *(APO) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0079.g017818 emb1629, APO2 organelle RNA splicing factor *(APO) & original... 0.04 OrthoFinder output from all 47 species
Sam_g17813 No alias organelle RNA splicing factor *(APO) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g13468 emb1629, APO2 organelle RNA splicing factor *(APO) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
InterPro domains Description Start Stop
IPR023342 APO_dom 314 432
IPR023342 APO_dom 95 244
No external refs found!