Azfi_s0195.g057240


Description : not classified & original description: CDS=1-2328


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0195.g057240

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00252350 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g22690... 0.02 OrthoFinder output from all 47 species
Adi_g012952 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036420 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g17771 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g18040 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g04109 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g23493 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g31164 SLO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g32458 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g36522 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g11288 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g22398 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g33192 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23402 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68030 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene70770.t1 Aspi01Gene70770 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0124.g048518 No alias not classified & original description: CDS=103-1761 0.03 OrthoFinder output from all 47 species
Azfi_s4317.g118724 No alias not classified & original description: CDS=1-465 0.02 OrthoFinder output from all 47 species
Cba_g15277 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75350 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.06G074600.1 Ceric.06G074600 not classified & original description: pacid=50619733... 0.02 OrthoFinder output from all 47 species
Ceric.09G032600.1 Ceric.09G032600 not classified & original description: pacid=50587514... 0.02 OrthoFinder output from all 47 species
Ceric.23G083100.1 Ceric.23G083100 ssDNA-binding protein *(OSB) & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g38857 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g49796 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g36369 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g14560 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g42280.1 CRR21, LOC_Os01g42280 RNA editing factor (CRR21) 0.02 OrthoFinder output from all 47 species
LOC_Os11g29230.1 CRR22, LOC_Os11g29230 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Len_g07300 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g07721 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07380 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_3462g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
MA_82569g0020 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
Msp_g17599 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g24971 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28092 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g15871 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11996 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g40150 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g57859 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g08130 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g51436 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo11063 REME1 Pentatricopeptide repeat-containing protein At2g34400... 0.03 OrthoFinder output from all 47 species
Smo136241 EMB2758 Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
Solyc02g069500.1.1 Solyc02g069500 Pentatricopeptide repeat-containing protein At4g21300... 0.03 OrthoFinder output from all 47 species
Solyc07g006990.3.1 Solyc07g006990 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Spa_g09284 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g45537 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g18426 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26883 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 186 233
IPR002885 Pentatricopeptide_repeat 290 335
IPR002885 Pentatricopeptide_repeat 78 124
IPR002885 Pentatricopeptide_repeat 596 643
IPR002885 Pentatricopeptide_repeat 392 438
IPR002885 Pentatricopeptide_repeat 493 540
IPR002885 Pentatricopeptide_repeat 160 180
IPR002885 Pentatricopeptide_repeat 264 286
IPR002885 Pentatricopeptide_repeat 366 391
No external refs found!