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  5. Azfi_s0188.g056770

Azfi_s0188.g056770 (OTP84)


Aliases : OTP84

Description : not classified & original description: CDS=1-2469


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0188.g056770

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00115350 RARE1,... Pentatricopeptide repeat-containing protein At5g13270,... 0.03 OrthoFinder output from all 47 species
AMTR_s00439p00011030 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g04780,... 0.04 OrthoFinder output from all 47 species
Aev_g02126 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g22420 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g33318 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0005.g009022 No alias not classified & original description: CDS=1-2334 0.06 OrthoFinder output from all 47 species
Azfi_s0045.g029919 No alias not classified & original description: CDS=1-2448 0.06 OrthoFinder output from all 47 species
Azfi_s0090.g042642 No alias not classified & original description: CDS=39-695 0.06 OrthoFinder output from all 47 species
Azfi_s0093.g043298 OSB3 ssDNA-binding protein *(OSB) & original description: CDS=1-1062 0.03 OrthoFinder output from all 47 species
Cba_g07747 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.12G018600.1 Ceric.12G018600 not classified & original description: pacid=50602205... 0.04 OrthoFinder output from all 47 species
Ceric.18G049100.1 Ceric.18G049100 not classified & original description: pacid=50621467... 0.05 OrthoFinder output from all 47 species
Ceric.1Z254100.1 Ceric.1Z254100 not classified & original description: pacid=50632850... 0.06 OrthoFinder output from all 47 species
Ceric.24G044900.1 CRR2, Ceric.24G044900 not classified & original description: pacid=50629668... 0.04 OrthoFinder output from all 47 species
Ceric.33G002700.1 Ceric.33G002700 not classified & original description: pacid=50606600... 0.04 OrthoFinder output from all 47 species
Dcu_g43324 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g51647 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g20526 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g47510 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g16047 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g24619 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g21989 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007241 No alias protein S-acyltransferase *(PAT22) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011560 No alias not classified & original description: CDS=661-2424 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014492 No alias not classified & original description: CDS=1-2247 0.04 OrthoFinder output from all 47 species
Spa_g21106 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g05998 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g20109 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e021453_P001 CRR28, Zm00001e021453 Pentatricopeptide repeat-containing protein At5g06540... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 173 219
IPR002885 Pentatricopeptide_repeat 412 459
IPR002885 Pentatricopeptide_repeat 275 316
IPR002885 Pentatricopeptide_repeat 486 508
IPR002885 Pentatricopeptide_repeat 76 105
IPR002885 Pentatricopeptide_repeat 586 607
IPR002885 Pentatricopeptide_repeat 378 408
IPR002885 Pentatricopeptide_repeat 249 269
IPR002885 Pentatricopeptide_repeat 687 711
IPR002885 Pentatricopeptide_repeat 514 538
IPR002885 Pentatricopeptide_repeat 616 636
IPR002885 Pentatricopeptide_repeat 350 376
No external refs found!