1. Home
  2. Species
  3. Azolla filiculoides
  4. Sequence
  5. Azfi_s0185.g056671

Azfi_s0185.g056671 (CAMTA3, SR1)


Aliases : CAMTA3, SR1

Description : CAMTA-type transcription factor & original description: CDS=82-3066


Gene families : OG0000648 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000648_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0185.g056671
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
Als_g16617 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17500 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
InterPro domains Description Start Stop
IPR005559 CG-1_dom 32 145
IPR002909 IPT_dom 428 510
IPR002110 Ankyrin_rpt 662 692
IPR000048 IQ_motif_EF-hand-BS 856 876
IPR000048 IQ_motif_EF-hand-BS 835 852
No external refs found!