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  5. Azfi_s0182.g056455

Azfi_s0182.g056455 (LYC)


Aliases : LYC

Description : EC_5.5 intramolecular lyase & original description: CDS=1-1671


Gene families : OG0004073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004073_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0182.g056455
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00097p00060630 LYC,... Secondary metabolism.terpenoids.terpenoid... 0.05 OrthoFinder output from all 47 species
AT3G10230 LYC lycopene cyclase 0.03 OrthoFinder output from all 47 species
Cre08.g358538 LYC Secondary metabolism.terpenoids.terpenoid... 0.04 OrthoFinder output from all 47 species
LOC_Os02g09750.1 LYC, LOC_Os02g09750 lycopene beta cyclase (LCY-b) 0.02 OrthoFinder output from all 47 species
Nbi_g29048 LYC EC_5.5 intramolecular lyase & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g14458 No alias EC_5.5 intramolecular lyase & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA

No InterPro domains available for this sequence

No external refs found!