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  5. Azfi_s0174.g055933

Azfi_s0174.g055933


Description : scaffold nucleoporin of nuclear pore complex *(RAE1) & original description: CDS=88-1158


Gene families : OG0004854 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004854_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0174.g055933
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
MA_27152g0010 No alias Protein RAE1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Mp5g18210.1 No alias RAE1 scaffold nucleoporin of nuclear pore complex 0.02 OrthoFinder output from all 47 species
Pir_g02489 No alias scaffold nucleoporin of nuclear pore complex *(RAE1) &... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 140 169
IPR001680 WD40_repeat 97 126
IPR001680 WD40_repeat 56 82
No external refs found!