Azfi_s0171.g055698 (RecQl3, ATRECQ3)

Aliases : RecQl3, ATRECQ3

Description : not classified & original description: CDS=1-1707

Gene families : OG0000844 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000844_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Azfi_s0171.g055698

Target	Alias	Description	ECC score	Gene Family Method
Adi_g006403	RecQl3, ATRECQ3	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g16350	RecQl3, ATRECQ3	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g19620	MED34, ATRECQ2, RECQL2	component *(MED34) of MEDIATOR transcription...	0.05	OrthoFinder output from all 47 species
Mp4g16510.1	RECQI1	ATP-dependent DNA helicase Q-like 1 OS=Arabidopsis...	0.07	OrthoFinder output from all 47 species
Mp7g16800.1	RecQl3, ATRECQ3	ATP-dependent DNA helicase Q-like 3 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Ore_g15364	RecQl3, ATRECQ3	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g41947	MED34, ATRECQ2, RECQL2	component *(MED34) of MEDIATOR transcription...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0117.g021122	MED34, ATRECQ2, RECQL2	not classified & original description: CDS=82-2226	0.02	OrthoFinder output from all 47 species
Solyc08g074600.4.1	MED34, ATRECQ2,...	component MED34 of MEDIATOR transcription co-activator complex	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEP	HCCA
BP	GO:0007165	signal transduction	IEP	HCCA
BP	GO:0035556	intracellular signal transduction	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR011545	DEAD/DEAH_box_helicase_dom	74	242
IPR032284	RecQ_Zn-bd	410	482
IPR001650	Helicase_C	282	397

External Links

No external refs found!