1. Home
  2. Species
  3. Azolla filiculoides
  4. Sequence
  5. Azfi_s0168.g054582

Azfi_s0168.g054582


Description : assembly factor involved in RuBisCo assembly *(BSD2) & original description: CDS=241-693


Gene families : OG0007502 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007502_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0168.g054582

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00065110 evm_27.TU.AmTr_v1... Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from all 47 species
AT3G47650 No alias DnaJ/Hsp40 cysteine-rich domain superfamily protein 0.08 OrthoFinder output from all 47 species
Aev_g06316 No alias assembly factor involved in RuBisCo assembly *(BSD2) &... 0.06 OrthoFinder output from all 47 species
Ala_g06623 No alias assembly factor involved in RuBisCo assembly *(BSD2) &... 0.07 OrthoFinder output from all 47 species
Als_g00356 No alias assembly factor involved in RuBisCo assembly *(BSD2) &... 0.06 OrthoFinder output from all 47 species
Aop_g26060 No alias assembly factor involved in RuBisCo assembly *(BSD2) &... 0.07 OrthoFinder output from all 47 species
Cba_g54988 No alias assembly factor involved in RuBisCo assembly *(BSD2) &... 0.04 OrthoFinder output from all 47 species
Ceric.36G042600.1 Ceric.36G042600 assembly factor involved in RuBisCo assembly *(BSD2) &... 0.02 OrthoFinder output from all 47 species
Dcu_g03433 No alias assembly factor involved in RuBisCo assembly *(BSD2) &... 0.04 OrthoFinder output from all 47 species
Dde_g14872 No alias assembly factor involved in RuBisCo assembly *(BSD2) &... 0.08 OrthoFinder output from all 47 species
LOC_Os06g22690.1 LOC_Os06g22690 BSD2 assembly factor involved in RuBisCo assembly 0.11 OrthoFinder output from all 47 species
Lfl_g40205 No alias assembly factor involved in RuBisCo assembly *(BSD2) &... 0.04 OrthoFinder output from all 47 species
Msp_g11910 No alias assembly factor involved in RuBisCo assembly *(BSD2) &... 0.03 OrthoFinder output from all 47 species
Msp_g29361 No alias assembly factor involved in RuBisCo assembly *(BSD2) &... 0.05 OrthoFinder output from all 47 species
Nbi_g01616 No alias assembly factor involved in RuBisCo assembly *(BSD2) &... 0.07 OrthoFinder output from all 47 species
Ore_g07584 No alias assembly factor involved in RuBisCo assembly *(BSD2) &... 0.04 OrthoFinder output from all 47 species
Ore_g07585 No alias assembly factor involved in RuBisCo assembly *(BSD2) &... 0.05 OrthoFinder output from all 47 species
Pir_g60370 No alias assembly factor involved in RuBisCo assembly *(BSD2) &... 0.04 OrthoFinder output from all 47 species
Pnu_g00272 No alias assembly factor involved in RuBisCo assembly *(BSD2) &... 0.04 OrthoFinder output from all 47 species
Ppi_g57647 No alias assembly factor involved in RuBisCo assembly *(BSD2) &... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0085.g018366 No alias assembly factor involved in RuBisCo assembly *(BSD2) &... 0.07 OrthoFinder output from all 47 species
Solyc12g009440.2.1 Solyc12g009440 BSD2 assembly factor involved in RuBisCo assembly 0.09 OrthoFinder output from all 47 species
Spa_g03931 No alias assembly factor involved in RuBisCo assembly *(BSD2) &... 0.06 OrthoFinder output from all 47 species
Tin_g09665 No alias assembly factor involved in RuBisCo assembly *(BSD2) &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003873 6-phosphofructo-2-kinase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006000 fructose metabolic process IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006553 lysine metabolic process IEP HCCA
MF GO:0008443 phosphofructokinase activity IEP HCCA
MF GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009085 lysine biosynthetic process IEP HCCA
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP HCCA
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0019200 carbohydrate kinase activity IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0046451 diaminopimelate metabolic process IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!