MA_10427291g0010


Description : RING-v-class E3 ligase


Gene families : OG_01_0000436 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000436_tree ,
OG_02_0000506 (LandPlants) Phylogenetic Tree(s): OG_02_0000506_tree ,
OG_03_0001067 (SeedPlants) Phylogenetic Tree(s): OG_03_0001067_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10427291g0010
Cluster HCCA: Cluster_268

Target Alias Description ECC score Gene Family Method Actions
AT5G62460 No alias RING/FYVE/PHD zinc finger superfamily protein 0.04 Archaeplastida
Gb_09261 No alias RING-v-class E3 ligase 0.03 Archaeplastida
LOC_Os01g03100.1 No alias RING-v-class E3 ligase 0.02 Archaeplastida
LOC_Os08g33860.1 No alias RING-v-class E3 ligase 0.02 Archaeplastida
LOC_Os11g38800.1 No alias RING-v-class E3 ligase 0.03 Archaeplastida
Solyc01g010880.3.1 No alias RING-v-class E3 ligase 0.02 Archaeplastida
Solyc08g014080.4.1 No alias RING-v-class E3 ligase 0.03 Archaeplastida
Gb_09261 No alias RING-v-class E3 ligase 0.03 LandPlants
LOC_Os01g03100.1 No alias RING-v-class E3 ligase 0.02 LandPlants
LOC_Os08g33860.1 No alias RING-v-class E3 ligase 0.02 LandPlants
Solyc01g010880.3.1 No alias RING-v-class E3 ligase 0.02 LandPlants
Solyc08g014080.4.1 No alias RING-v-class E3 ligase 0.03 LandPlants
Gb_09261 No alias RING-v-class E3 ligase 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011016 Znf_RING-CH 39 84
IPR022143 DUF3675 90 206
No external refs found!