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  5. Azfi_s0154.g053555

Azfi_s0154.g053555


Description : not classified & original description: CDS=63-1850


Gene families : OG0001248 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001248_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0154.g053555

Target Alias Description ECC score Gene Family Method Actions
Adi_g026244 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g01967 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008094 No alias not classified & original description: CDS=1-1671 0.03 OrthoFinder output from all 47 species
Spa_g07865 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006415 translational termination IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0030688 preribosome, small subunit precursor IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR029413 RG-lyase_II 414 482
IPR010325 Rhamnogal_lyase 41 229
IPR029411 RG-lyase_III 500 614
No external refs found!