Azfi_s0151.g053374


Description : ssDNA-binding protein *(OSB) & original description: CDS=217-2670


Gene families : OG0013460 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0013460_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0151.g053374
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
Adi_g003221 CRR22 not classified & original description: none 0.01 OrthoFinder output from all 39 species
Ceric.22G072200.1 Ceric.22G072200 not classified & original description: pacid=50614353... 0.01 OrthoFinder output from all 39 species
Dac_g36042 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Len_g44151 No alias not classified & original description: none 0.02 OrthoFinder output from all 39 species
Lfl_g22008 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 39 species
Msp_g41395 No alias not classified & original description: none 0.02 OrthoFinder output from all 39 species
Pir_g02826 No alias not classified & original description: none 0.02 OrthoFinder output from all 39 species
Tin_g26722 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP HCCA
BP GO:0006528 asparagine metabolic process IEP HCCA
BP GO:0006529 asparagine biosynthetic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 658 705
IPR002885 Pentatricopeptide_repeat 453 500
IPR002885 Pentatricopeptide_repeat 145 192
IPR002885 Pentatricopeptide_repeat 556 601
IPR002885 Pentatricopeptide_repeat 247 295
IPR002885 Pentatricopeptide_repeat 350 397
IPR002885 Pentatricopeptide_repeat 732 755
IPR002885 Pentatricopeptide_repeat 427 451
IPR002885 Pentatricopeptide_repeat 325 347
No external refs found!