Solyc08g081000.3.1 (Solyc08g081000.3)


Aliases : Solyc08g081000.3

Description : No description available


Gene families : OG_01_0004008 (Gene family) Phylogenetic Tree(s): OG0004008_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc08g081000.3.1
Cluster HCCA cluster: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AT1G63490 No alias transcription factor jumonji (jmjC) domain-containing protein 0.03 Gene family
Cre12.g514250 No alias 27.3.57 RNA.regulation of transcription.JUMONJI family... 0.02 Gene family
GSVIVT01019761001 No alias No description available 0.02 Gene family
Zm00001d014900 GRMZM2G466270,... No description available 0.05 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004198 Znf_C5HC2 627 679
IPR001606 ARID_dom 107 188
IPR003349 JmjN 32 65
IPR019787 Znf_PHD-finger 247 294
IPR003347 JmjC_dom 418 534
IPR013637 Lys_sp_deMease-like_dom 893 1186
IPR013637 Lys_sp_deMease-like_dom 1146 1410
No external refs found!