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  5. Azfi_s0145.g051660

Azfi_s0145.g051660 (J20)


Aliases : J20

Description : not classified & original description: CDS=185-709


Gene families : OG0000227 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000227_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0145.g051660
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
Aev_g00783 J20 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g13865 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene38054.t1 J20, Aspi01Gene38054 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01014782001 No alias Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis thaliana 0.08 OrthoFinder output from all 47 species
LOC_Os01g01160.1 J20, LOC_Os01g01160 Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Msp_g44964 J20 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g11256 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g10561 J20 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13090 J20 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g31069 J20 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e024686_P001 Zm00001e024686 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 46 110
IPR002885 Pentatricopeptide_repeat 674 702
IPR002885 Pentatricopeptide_repeat 395 418
IPR002885 Pentatricopeptide_repeat 569 598
IPR002885 Pentatricopeptide_repeat 468 495
IPR002885 Pentatricopeptide_repeat 647 664
IPR002885 Pentatricopeptide_repeat 706 754
IPR002885 Pentatricopeptide_repeat 497 546
No external refs found!