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  5. Azfi_s0144.g051566

Azfi_s0144.g051566


Description : not classified & original description: CDS=1-1788


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0144.g051566

Target Alias Description ECC score Gene Family Method Actions
Adi_g067784 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g18205 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06645 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g18705 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g19954 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene03152.t1 Aspi01Gene03152 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene38583.t1 PTAC9, OSB2,... ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G015700.1 Ceric.13G015700 not classified & original description: pacid=50636078... 0.05 OrthoFinder output from all 47 species
Ceric.15G066400.1 Ceric.15G066400 not classified & original description: pacid=50640755... 0.05 OrthoFinder output from all 47 species
Ceric.19G003900.1 Ceric.19G003900 not classified & original description: pacid=50575192... 0.02 OrthoFinder output from all 47 species
Ceric.28G027200.1 DOT4, Ceric.28G027200 not classified & original description: pacid=50570918... 0.07 OrthoFinder output from all 47 species
Dcu_g05682 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g17197 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g10498 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g23215 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g28915 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g36038 MEF19 not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os06g08660.1 LOC_Os06g08660 Pentatricopeptide repeat-containing protein At4g30700... 0.07 OrthoFinder output from all 47 species
Len_g54971 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10138132g0010 No alias Pentatricopeptide repeat-containing protein At3g02330,... 0.04 OrthoFinder output from all 47 species
Msp_g12146 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05885 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g15298 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g19047 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g25096 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g32070 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g38538 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g38654 DOT4 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g41062 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g29175 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g02847 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g63807 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g06488 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g09254 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g53545 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Smo132317 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.05 OrthoFinder output from all 47 species
Spa_g09530 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g53369 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g56533 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g11710 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g14871 OTP86 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e010182_P001 Zm00001e010182 Pentatricopeptide repeat-containing protein At2g36980,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 482 513
IPR002885 Pentatricopeptide_repeat 309 361
IPR002885 Pentatricopeptide_repeat 418 447
IPR002885 Pentatricopeptide_repeat 212 260
IPR002885 Pentatricopeptide_repeat 116 161
No external refs found!