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  5. Azfi_s0143.g051480

Azfi_s0143.g051480


Description : substrate adaptor *(OZS3) of CUL4-DDB1 E3 ubiquitin ligase complex & original description: CDS=138-1916


Gene families : OG0006328 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006328_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0143.g051480

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000704.40 No alias No description available 0.01 OrthoFinder output from all 47 species
Dcu_g22788 No alias substrate adaptor *(OZS3) of CUL4-DDB1 E3 ubiquitin... 0.04 OrthoFinder output from all 47 species
Sam_g37904 No alias substrate adaptor *(OZS3) of CUL4-DDB1 E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Spa_g04434 No alias substrate adaptor *(OZS3) of CUL4-DDB1 E3 ubiquitin... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006368 transcription elongation by RNA polymerase II IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
CC GO:0008023 transcription elongation factor complex IEP HCCA
BP GO:0016570 histone modification IEP HCCA
CC GO:0016593 Cdc73/Paf1 complex IEP HCCA
MF GO:0042393 histone binding IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 318 351
IPR001680 WD40_repeat 220 255
IPR001680 WD40_repeat 128 153
No external refs found!