Solyc08g080540.3.1 (Solyc08g080540.3)


Aliases : Solyc08g080540.3

Description : No description available


Gene families : OG_01_0000083 (Gene family) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc08g080540.3.1
Cluster HCCA cluster: Cluster_227

Target Alias Description ECC score Gene Family Method Actions
AT2G26150 HSFA2, ATHSFA2 heat shock transcription factor A2 0.04 Gene family
AT3G02990 HSFA1E, ATHSFA1E heat shock transcription factor A1E 0.02 Gene family
AT3G63350 HSFA7B, AT-HSFA7B winged-helix DNA-binding transcription factor family protein 0.02 Gene family
AT4G36990 HSF4, HSFB1,... heat shock factor 4 0.06 Gene family
AT5G43840 HSFA6A, AT-HSFA6A heat shock transcription factor A6A 0.02 Gene family
AT5G62020 AT-HSFB2A, HSFB2A heat shock transcription factor B2A 0.02 Gene family
GSVIVT01003118001 No alias No description available 0.01 Gene family
GSVIVT01019829001 No alias No description available 0.04 Gene family
LOC_Os03g53340 Os03g0745000 No description available 0.04 Gene family
LOC_Os03g63750 Os03g0854500 20.2.1 stress.abiotic.heat Encodes a putative... 0.03 Gene family
LOC_Os04g48030 Os04g0568700 No description available 0.05 Gene family
LOC_Os06g36930 Os06g0565200 No description available 0.04 Gene family
LOC_Os08g43334 Os08g0546800 No description available 0.04 Gene family
LOC_Os09g28354 Os09g0456800 20.2.1 stress.abiotic.heat encodes a protein whose... 0.02 Gene family
LOC_Os09g35790 Os09g0526600 No description available 0.01 Gene family
LOC_Os10g28340 Os10g0419300 No description available 0.04 Gene family
MA_5374g0010 No alias No description available 0.02 Gene family
Smo107503 PACid_15421312 No description available 0.03 Gene family
Smo39384 PACid_15417350 No description available 0.02 Gene family
Smo92634 PACid_15419911 No description available 0.02 Gene family
Smo93081 PACid_15418385 27.3.23 RNA.regulation of transcription.HSF,Heat-shock... 0.01 Gene family
Solyc02g090820.3.1 Solyc02g090820.3 20.2.1 stress.abiotic.heat encodes a protein whose... 0.04 Gene family
Solyc03g097120.3.1 Solyc03g097120.3 20.2.1 stress.abiotic.heat Encodes a putative... 0.02 Gene family
Solyc06g053960.3.1 Solyc06g053960.3 No description available 0.02 Gene family
Zm00001d012749 GRMZM2G118453 No description available 0.02 Gene family
Zm00001d012823 GRMZM2G384339 20.2.1 stress.abiotic.heat Encodes a putative... 0.02 Gene family
Zm00001d022295 GRMZM2G025685 No description available 0.01 Gene family
Zm00001d026094 GRMZM2G301485 No description available 0.05 Gene family
Zm00001d031736 GRMZM2G164909 No description available 0.01 Gene family
Zm00001d032923 GRMZM2G010871 27.3.23 RNA.regulation of transcription.HSF,Heat-shock... 0.04 Gene family
Zm00001d033987 GRMZM2G003489 No description available 0.04 Gene family
Zm00001d046204 GRMZM2G173090 No description available 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
CC GO:0005634 nucleus IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
MF GO:0043565 sequence-specific DNA binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000232 HSF_DNA-bd 25 114
No external refs found!