Solyc08g080120.3.1 (Solyc08g080120.3)

Aliases : Solyc08g080120.3

Description : 27.3.22 RNA.regulation of transcription.HB,Homeobox transcription factor family Encodes a homeodomain transcription factor of the Knotted family. May be involved in secondary cell wall biosynthesis. Mutants have moderately irregular xylem development. Expression of this gene is upregulated by SND1 and MYB46. KNOTTED-like homeobox of Arabidopsis thaliana 7 (KNAT7)

Gene families : OG_01_0000241 (Gene family) Phylogenetic Tree(s): OG0000241_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc08g080120.3.1
Cluster HCCA cluster: Cluster_213

Target Alias Description ECC score Gene Family Method Actions
AT4G32040 KNAT5 KNOTTED1-like homeobox gene 5 0.02 Gene family
LOC_Os07g03770 Os07g0129700 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
CC GO:0005634 nucleus IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR005541 KNOX2 106 156
IPR008422 Homeobox_KN_domain 253 292
IPR005540 KNOX1 45 86
No external refs found!