- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : not classified & original description: CDS=1-2007
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00010p00246970 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g39530... | 0.03 | OrthoFinder output from all 47 species | |
| AT3G20730 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT3G47840 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT4G25270 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g005224 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g008833 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g035623 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g095424 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g101343 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g06589 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g09167 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g36027 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g05087 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g07035 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g19051 | DOT4 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g30646 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Als_g30789 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g54371 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene01610.t1 | CRR22, Aspi01Gene01610 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene01654.t1 | PTAC9, OSB2,... | ssDNA-binding protein *(OSB) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene04806.t1 | Aspi01Gene04806 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene12038.t1 | Aspi01Gene12038 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene22967.t2 | Aspi01Gene22967 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene25447.t1 | Aspi01Gene25447 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene31466.t1 | Aspi01Gene31466 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene34036.t1 | CRR22, Aspi01Gene34036 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene34731.t1 | Aspi01Gene34731 | ssDNA-binding protein *(OSB) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene36332.t1 | Aspi01Gene36332 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene36735.t1 | Aspi01Gene36735 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene67429.t1 | Aspi01Gene67429 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.34G009900.1 | Ceric.34G009900 | not classified & original description: pacid=50623876... | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g04238 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g22020 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g23491 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g25000 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os07g31000.1 | LOC_Os07g31000 | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| Len_g07742 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g08934 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g17788 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g18045 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g18472 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Len_g18564 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g18945 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g18958 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g18959 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g22400 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g25978 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g35291 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g41042 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g44381 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g44849 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g47056 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g58985 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g59570 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g34619 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g05803 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g07709 | OTP86 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g17599 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g18562 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g24971 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g28110 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g31910 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g34405 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g44153 | OTP82 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g09990 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g22972 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g26309 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g35928 | EMB2758 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g56364 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g61252 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0004.g002236 | No alias | not classified & original description: CDS=1-2649 | 0.01 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0007.g003756 | No alias | not classified & original description: CDS=1-1965 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0019.g007793 | MEF19 | not classified & original description: CDS=1-1725 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0024.g009016 | No alias | not classified & original description: CDS=1-2955 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0040.g012385 | No alias | not classified & original description: CDS=1-1908 | 0.01 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0055.g014482 | No alias | not classified & original description: CDS=1-1119 | 0.01 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0137.g022493 | No alias | not classified & original description: CDS=1-2544 | 0.01 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0237.g026572 | No alias | not classified & original description: CDS=1-1578 | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g33092 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Smo102603 | CRR2 | Pentatricopeptide repeat-containing protein At3g12770... | 0.01 | OrthoFinder output from all 47 species | |
| Smo105356 | No alias | Pentatricopeptide repeat-containing protein At3g63370,... | 0.02 | OrthoFinder output from all 47 species | |
| Smo84746 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.02 | OrthoFinder output from all 47 species | |
| Smo92008 | No alias | Pentatricopeptide repeat-containing protein At3g09040,... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc12g096680.1.1 | REME1, Solyc12g096680 | Pentatricopeptide repeat-containing protein At2g03880,... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g03388 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g05031 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g06463 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g12995 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 468 | 491 |
| IPR002885 | Pentatricopeptide_repeat | 290 | 317 |
| IPR002885 | Pentatricopeptide_repeat | 151 | 176 |
| IPR002885 | Pentatricopeptide_repeat | 262 | 286 |
| IPR002885 | Pentatricopeptide_repeat | 364 | 388 |
| IPR002885 | Pentatricopeptide_repeat | 494 | 541 |
| IPR002885 | Pentatricopeptide_repeat | 391 | 441 |
| IPR002885 | Pentatricopeptide_repeat | 74 | 123 |
| No external refs found! |