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  5. Azfi_s0132.g049172

Azfi_s0132.g049172


Description : component *(uS19) of small ribosomal-subunit (SSU) proteome & original description: CDS=1-534


Gene families : OG0002650 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002650_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0132.g049172

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00076070 RPS15,... Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 OrthoFinder output from all 47 species
AT1G04270 RPS15 cytosolic ribosomal protein S15 0.16 OrthoFinder output from all 47 species
AT5G09510 No alias Ribosomal protein S19 family protein 0.14 OrthoFinder output from all 47 species
Adi_g040175 RPS15 component *(uS19) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Als_g26573 No alias component *(uS19) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Aop_g67230 No alias component *(uS19) of small ribosomal-subunit (SSU)... 0.06 OrthoFinder output from all 47 species
Cba_g04970 No alias component *(uS19) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Ceric.1Z099000.1 Ceric.1Z099000 component *(uS19) of small ribosomal-subunit (SSU)... 0.2 OrthoFinder output from all 47 species
Ceric.37G059400.1 Ceric.37G059400 component *(uS19) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020830.61 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.12 OrthoFinder output from all 47 species
Cre08.g360900 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.17 OrthoFinder output from all 47 species
Dac_g29771 No alias component *(uS19) of small ribosomal-subunit (SSU)... 0.09 OrthoFinder output from all 47 species
Dcu_g50656 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g47858 No alias component *(uS19) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
GSVIVT01000754001 RPS15 Protein biosynthesis.cytosolic ribosome.small subunit... 0.09 OrthoFinder output from all 47 species
GSVIVT01018113001 RPS15 Protein biosynthesis.cytosolic ribosome.small subunit... 0.11 OrthoFinder output from all 47 species
Gb_16516 No alias component RPS15 of SSU proteome 0.09 OrthoFinder output from all 47 species
Gb_36524 RPS15 component RPS15 of SSU proteome 0.08 OrthoFinder output from all 47 species
LOC_Os03g58430.1 LOC_Os03g58430 component RPS15 of SSU proteome 0.2 OrthoFinder output from all 47 species
LOC_Os07g08660.1 LOC_Os07g08660 component RPS15 of SSU proteome 0.14 OrthoFinder output from all 47 species
Len_g14378 No alias component *(uS19) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Len_g22890 No alias component *(uS19) of small ribosomal-subunit (SSU)... 0.06 OrthoFinder output from all 47 species
Lfl_g24533 No alias component *(uS19) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
MA_14543g0010 No alias component RPS15 of SSU proteome 0.1 OrthoFinder output from all 47 species
MA_18691g0010 No alias 40S ribosomal protein S15 OS=Picea mariana... 0.11 OrthoFinder output from all 47 species
Mp3g15000.1 No alias component RPS15 of SSU proteome 0.16 OrthoFinder output from all 47 species
Msp_g19538 No alias component *(uS19) of small ribosomal-subunit (SSU)... 0.06 OrthoFinder output from all 47 species
Nbi_g26940 No alias component *(uS19) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Pp3c13_19770V3.1 Pp3c13_19770 Ribosomal protein S19 family protein 0.02 OrthoFinder output from all 47 species
Pp3c3_23700V3.1 Pp3c3_23700 Ribosomal protein S19 family protein 0.09 OrthoFinder output from all 47 species
Sacu_v1.1_s0060.g015225 No alias component *(uS19) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Sam_g13440 No alias component *(uS19) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Sam_g32727 No alias component *(uS19) of small ribosomal-subunit (SSU)... 0.06 OrthoFinder output from all 47 species
Sam_g38072 No alias component *(uS19) of small ribosomal-subunit (SSU)... 0.11 OrthoFinder output from all 47 species
Smo172403 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.06 OrthoFinder output from all 47 species
Solyc02g082000.3.1 RPS15, Solyc02g082000 component RPS15 of SSU proteome 0.13 OrthoFinder output from all 47 species
Solyc09g083370.3.1 RPS15, Solyc09g083370 component RPS15 of SSU proteome 0.2 OrthoFinder output from all 47 species
Spa_g03572 No alias component *(uS19) of small ribosomal-subunit (SSU)... 0.13 OrthoFinder output from all 47 species
Spa_g04015 No alias component *(uS19) of small ribosomal-subunit (SSU)... 0.11 OrthoFinder output from all 47 species
Tin_g10752 No alias component *(uS19) of small ribosomal-subunit (SSU)... 0.09 OrthoFinder output from all 47 species
Zm00001e011449_P001 Zm00001e011449 component RPS15 of SSU proteome 0.14 OrthoFinder output from all 47 species
Zm00001e011450_P001 Zm00001e011450 component RPS15 of SSU proteome 0.08 OrthoFinder output from all 47 species
Zm00001e032961_P001 Zm00001e032961 component RPS15 of SSU proteome 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
InterPro domains Description Start Stop
IPR002222 Ribosomal_S19 75 160
No external refs found!