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  5. Azfi_s0131.g049135

Azfi_s0131.g049135 (ATMED14, MED14, SWP)


Aliases : ATMED14, MED14, SWP

Description : component *(MED14) of tail module of MEDIATOR transcription co-activator complex & original description: CDS=138-4772


Gene families : OG0003954 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003954_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0131.g049135
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
AT3G04740 ATMED14, MED14, SWP RNA polymerase II transcription mediators 0.07 OrthoFinder output from all 47 species
Aob_g36685 ATMED14, MED14, SWP component *(MED14) of tail module of MEDIATOR... 0.02 OrthoFinder output from all 47 species
Ceric.06G040100.1 ATMED14, MED14,... component *(MED14) of tail module of MEDIATOR... 0.05 OrthoFinder output from all 47 species
Cre03.g190550 No alias No description available 0.01 OrthoFinder output from all 47 species
GSVIVT01021781001 ATMED14, MED14, SWP RNA biosynthesis.RNA polymerase II-dependent... 0.04 OrthoFinder output from all 47 species
LOC_Os08g24420.1 ATMED14, MED14,... component MED14 of tail module of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
LOC_Os09g10960.1 ATMED14, MED14,... component MED14 of tail module of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Mp8g13300.1 ATMED14, MED14, SWP component MED14 of tail module of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Msp_g13510 ATMED14, MED14, SWP component *(MED14) of tail module of MEDIATOR... 0.03 OrthoFinder output from all 47 species
Nbi_g16571 ATMED14, MED14, SWP component *(MED14) of tail module of MEDIATOR... 0.05 OrthoFinder output from all 47 species
Pir_g05142 ATMED14, MED14, SWP component *(MED14) of tail module of MEDIATOR... 0.03 OrthoFinder output from all 47 species
Pnu_g13861 ATMED14, MED14, SWP component *(MED14) of tail module of MEDIATOR... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008172 ATMED14, MED14, SWP component *(MED14) of tail module of MEDIATOR... 0.07 OrthoFinder output from all 47 species
Sam_g17509 No alias component *(MED14) of tail module of MEDIATOR... 0.03 OrthoFinder output from all 47 species
Solyc01g097320.3.1 ATMED14, MED14,... component MED14 of tail module of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Tin_g09950 ATMED14, MED14, SWP component *(MED14) of tail module of MEDIATOR... 0.03 OrthoFinder output from all 47 species
Zm00001e009618_P001 ATMED14, MED14,... component MED14 of tail module of MEDIATOR transcription... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
BP GO:0009581 detection of external stimulus IEP HCCA
BP GO:0009582 detection of abiotic stimulus IEP HCCA
BP GO:0009583 detection of light stimulus IEP HCCA
BP GO:0009584 detection of visible light IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
BP GO:0051606 detection of stimulus IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!