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  5. Azfi_s0130.g049023

Azfi_s0130.g049023 (EMB2771)


Aliases : EMB2771

Description : component *(APC1) of (APC/C)-dependent ubiquitination platform subcomplex & original description: CDS=107-5581


Gene families : OG0006432 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006432_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0130.g049023

Target Alias Description ECC score Gene Family Method Actions
AT5G05560 EMB2771 E3 ubiquitin ligase, putative 0.04 OrthoFinder output from all 47 species
Als_g17485 EMB2771 component *(APC1) of (APC/C)-dependent ubiquitination... 0.03 OrthoFinder output from all 47 species
Ceric.30G071400.1 EMB2771, Ceric.30G071400 component *(APC1) of (APC/C)-dependent ubiquitination... 0.05 OrthoFinder output from all 47 species
Cre13.g579100 EMB2771 Anaphase-promoting complex subunit 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01032797001 EMB2771 Cell cycle.mitosis and meiosis.metaphase to anaphase... 0.06 OrthoFinder output from all 47 species
Gb_37425 EMB2771 component APC1 of (APC/C)-dependent ubiquitination... 0.05 OrthoFinder output from all 47 species
Lfl_g38762 EMB2771 component *(APC1) of (APC/C)-dependent ubiquitination... 0.04 OrthoFinder output from all 47 species
MA_10428431g0010 EMB2771 Anaphase-promoting complex subunit 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Msp_g13981 EMB2771 component *(APC1) of (APC/C)-dependent ubiquitination... 0.04 OrthoFinder output from all 47 species
Ppi_g10085 EMB2771 component *(APC1) of (APC/C)-dependent ubiquitination... 0.03 OrthoFinder output from all 47 species
Smo126964 EMB2771 Cell cycle.mitosis and meiosis.metaphase to anaphase... 0.04 OrthoFinder output from all 47 species
Zm00001e031482_P002 EMB2771, Zm00001e031482 component APC1 of (APC/C)-dependent ubiquitination... 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005680 anaphase-promoting complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0043138 3'-5' DNA helicase activity IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR046794 Apc1_MidN 419 571
IPR046794 Apc1_MidN 618 677
IPR024990 Apc1 4 44
IPR041221 APC1_C 1496 1669
No external refs found!