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Description : not classified & original description: CDS=1-2157
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00003p00263110 | No alias | Pentatricopeptide repeat-containing protein At1g03540... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00056p00185560 | VAC1, ECB2, ATECB2 | RNA processing.organelle machineries.RNA... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00061p00158010 | evm_27.TU.AmTr_v1... | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00066p00062930 | EMB2261,... | Pentatricopeptide repeat-containing protein At3g49170,... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00083p00015670 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00439p00011030 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At5g04780,... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s02193p00008230 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At3g02330,... | 0.04 | OrthoFinder output from all 47 species | |
| AT5G59600 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g015952 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g035616 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g047468 | LPA66 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g08105 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g15903 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g08049 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene01654.t1 | PTAC9, OSB2,... | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene03412.t2 | Aspi01Gene03412 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene19500.t2 | Aspi01Gene19500 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene28051.t1 | Aspi01Gene28051 | cofactor of plastid-encoded RNA polymerase *(TAC9) &... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene29787.t2 | Aspi01Gene29787 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene34698.t1 | Aspi01Gene34698 | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene36332.t2 | Aspi01Gene36332 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene43499.t1 | REME1, Aspi01Gene43499 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene54509.t1 | Aspi01Gene54509 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene65182.t1 | OTP86, Aspi01Gene65182 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene68665.t1 | CRR22, Aspi01Gene68665 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0069.g036571 | No alias | not classified & original description: CDS=1-1638 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0090.g042642 | No alias | not classified & original description: CDS=39-695 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s1396.g102567 | No alias | not classified & original description: CDS=1-1371 | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.1Z254100.1 | Ceric.1Z254100 | not classified & original description: pacid=50632850... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.22G020200.1 | Ceric.22G020200 | not classified & original description: pacid=50615278... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.29G083600.1 | Ceric.29G083600 | ssDNA-binding protein *(OSB) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g06831 | PTAC9, OSB2 | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g07128 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g08450 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g16664 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g03959 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g04001 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g21994 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g22180 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g46744 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g52009 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Gb_00776 | No alias | Pentatricopeptide repeat-containing protein At5g50390,... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_21443 | OTP86 | Pentatricopeptide repeat-containing protein At3g63370,... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_34736 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g04390.1 | LOC_Os03g04390 | Pentatricopeptide repeat-containing protein At4g35130,... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g39410.1 | OTP86, LOC_Os04g39410 | RNA editing factor (OTP86) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os10g39460.2 | LOC_Os10g39460 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g04816 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g05403 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g05435 | CRR22 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g18535 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g44704 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_123466g0010 | CRR22 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.02 | OrthoFinder output from all 47 species | |
| MA_81514g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g43460 | CRR22 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g44335 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g06798 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g30106 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g26843 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g32476 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g60415 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0008.g003970 | No alias | not classified & original description: CDS=1-3009 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0008.g004138 | No alias | not classified & original description: CDS=1-2646 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0017.g007241 | No alias | protein S-acyltransferase *(PAT22) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0017.g007299 | No alias | not classified & original description: CDS=1-3327 | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0037.g011851 | OTP84 | not classified & original description: CDS=1-2175 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0049.g013695 | No alias | not classified & original description: CDS=1-2949 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0086.g018405 | No alias | not classified & original description: CDS=1-2268 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0117.g021127 | No alias | not classified & original description: CDS=28-1563 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0124.g021578 | MEF19 | not classified & original description: CDS=1-1950 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g03859 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g12389 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g13666 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g36251 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g50428 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo132819 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| Smo92008 | No alias | Pentatricopeptide repeat-containing protein At3g09040,... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e015440_P001 | CRR22, Zm00001e015440 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e015727_P001 | Zm00001e015727 | Pentatricopeptide repeat-containing protein At5g66520... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e016923_P001 | CRR2, Zm00001e016923 | Pentatricopeptide repeat-containing protein At3g46790,... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 367 | 413 |
| IPR002885 | Pentatricopeptide_repeat | 265 | 313 |
| IPR002885 | Pentatricopeptide_repeat | 567 | 615 |
| IPR002885 | Pentatricopeptide_repeat | 467 | 513 |
| IPR002885 | Pentatricopeptide_repeat | 163 | 210 |
| IPR002885 | Pentatricopeptide_repeat | 643 | 667 |
| IPR002885 | Pentatricopeptide_repeat | 439 | 462 |
| No external refs found! |