Azfi_s0123.g048442


Description : not classified & original description: CDS=180-2516


Gene families : OG0005853 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005853_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0123.g048442

Target Alias Description ECC score Gene Family Method Actions
Adi_g059251 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15352 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g25755 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.13G087700.1 Ceric.13G087700 not classified & original description: pacid=50636878... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020943.85 No alias DEAD-box ATP-dependent RNA helicase 13 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Dac_g46202 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g01929 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os04g43140.1 LOC_Os04g43140 DEAD-box ATP-dependent RNA helicase 13 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Mp5g03860.1 No alias DEAD-box ATP-dependent RNA helicase 13 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Ppi_g63313 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g15235 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc09g090740.4.1 Solyc09g090740 DEAD-box ATP-dependent RNA helicase 13 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0004683 calmodulin-dependent protein kinase activity IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0043647 inositol phosphate metabolic process IEP HCCA
BP GO:0046164 alcohol catabolic process IEP HCCA
BP GO:0046174 polyol catabolic process IEP HCCA
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP HCCA
BP GO:0046855 inositol phosphate dephosphorylation IEP HCCA
BP GO:0071545 inositol phosphate catabolic process IEP HCCA
MF GO:0140612 DNA damage sensor activity IEP HCCA
MF GO:0140664 ATP-dependent DNA damage sensor activity IEP HCCA
BP GO:1901616 organic hydroxy compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001650 Helicase_C 501 608
IPR011545 DEAD/DEAH_box_helicase_dom 221 434
No external refs found!