Solyc08g079700.2.1 (Solyc08g079700.2)


Aliases : Solyc08g079700.2

Description : 27.3.99 RNA.regulation of transcription.unclassified A20/AN1-like zinc finger family protein


Gene families : OG_01_0000352 (Gene family) Phylogenetic Tree(s): OG0000352_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc08g079700.2.1
Cluster HCCA cluster: Cluster_227

Target Alias Description ECC score Gene Family Method Actions
AT3G52800 No alias A20/AN1-like zinc finger family protein 0.05 Gene family
AT4G22820 No alias A20/AN1-like zinc finger family protein 0.03 Gene family
LOC_Os03g57900 Os03g0793000 27.3.99 RNA.regulation of transcription.unclassified... 0.04 Gene family
LOC_Os09g31200 Os09g0486500 27.3.99 RNA.regulation of transcription.unclassified... 0.03 Gene family
MA_65887g0010 No alias 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.02 Gene family
Smo150464 PACid_15414106 27.3.99 RNA.regulation of transcription.unclassified... 0.07 Gene family
Solyc09g009590.1.1 Solyc09g009590.1 27.3.99 RNA.regulation of transcription.unclassified... 0.04 Gene family
Solyc11g061770.2.1 Solyc11g061770.2 27.3.99 RNA.regulation of transcription.unclassified... 0.03 Gene family
Zm00001d006016 GRMZM2G134334 27.3.99 RNA.regulation of transcription.unclassified... 0.02 Gene family
Zm00001d020926 GRMZM2G083894 27.3.99 RNA.regulation of transcription.unclassified... 0.02 Gene family
Zm00001d031423 GRMZM2G441903 27.3.99 RNA.regulation of transcription.unclassified... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
MF GO:0008270 zinc ion binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000058 Znf_AN1 150 184
IPR002653 Znf_A20 62 85
No external refs found!