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  5. Azfi_s0121.g046826

Azfi_s0121.g046826 (ICU4, ATHB15, ATHB-15, CNA)


Aliases : ICU4, ATHB15, ATHB-15, CNA

Description : HD-ZIP III-type transcription factor & original description: CDS=924-3428


Gene families : OG0000446 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000446_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0121.g046826
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00148p00033940 PHB-1D, ATHB-14,... RNA biosynthesis.transcriptional activation.HB... 0.01 OrthoFinder output from all 47 species
Adi_g022450 PHB-1D, ATHB-14,... HD-ZIP III-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g07482 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g09861 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Als_g33686 PHB-1D, ATHB-14,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g37903 HB-8, ATHB8, ATHB-8 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g46485 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g22190 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene27214.t2 ICU4, ATHB15,... transcriptional co-regulator *(ZPR) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene36277.t1 ICU4, ATHB15,... transcriptional co-regulator *(ZPR) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene40226.t1 ICU4, ATHB15,... transcriptional co-regulator *(ZPR) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene56782.t1 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0004.g008557 ICU4, ATHB15,... transcriptional co-regulator *(ZPR) & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0047.g030268 ICU4, ATHB15,... transcriptional co-regulator *(ZPR) & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0292.g063366 PHB-1D, ATHB-14,... not classified & original description: CDS=845-1303 0.02 OrthoFinder output from all 47 species
Azfi_s0296.g063557 PHB-1D, ATHB-14,... not classified & original description: CDS=1-945 0.06 OrthoFinder output from all 47 species
Cba_g23018 ICU4, ATHB15,... transcriptional co-regulator *(ZPR) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.17G020900.1 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original... 0.01 OrthoFinder output from all 47 species
Ceric.31G005400.1 HB-8, ATHB8,... transcriptional co-regulator *(ZPR) & original... 0.02 OrthoFinder output from all 47 species
Dac_g07114 ICU4, ATHB15,... transcriptional co-regulator *(ZPR) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g38205 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07882 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g10870 ICU4, ATHB15,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12681 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g31340 PHB-1D, ATHB-14,... HD-ZIP III-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01017010001 ICU4, ATHB15,... RNA biosynthesis.transcriptional activation.HB... 0.01 OrthoFinder output from all 47 species
GSVIVT01025193001 IFL1, IFL, REV RNA biosynthesis.transcriptional activation.HB... 0.04 OrthoFinder output from all 47 species
GSVIVT01035612001 ICU4, ATHB15,... RNA biosynthesis.transcriptional activation.HB... 0.02 OrthoFinder output from all 47 species
LOC_Os03g01890.1 IFL1, IFL, REV,... transcription factor (HD-ZIP III) 0.03 OrthoFinder output from all 47 species
LOC_Os03g43930.1 PHB-1D, ATHB-14,... transcription factor (HD-ZIP III) 0.03 OrthoFinder output from all 47 species
LOC_Os06g50679.1 ICU4, ATHB15,... Homeobox-leucine zipper protein HOX29 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Len_g19010 ICU4, ATHB15,... transcriptional co-regulator *(ZPR) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g28331 ICU4, ATHB15,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10427484g0010 ICU4, ATHB15,... transcription factor (HD-ZIP III) 0.03 OrthoFinder output from all 47 species
MA_10435903g0020 ICU4, ATHB15,... Homeobox-leucine zipper protein ATHB-15 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_10436137g0010 ICU4, ATHB15,... Homeobox-leucine zipper protein ATHB-15 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_112057g0010 ICU4, ATHB15,... transcription factor (HD-ZIP III) 0.02 OrthoFinder output from all 47 species
MA_19520g0020 ICU4, ATHB15,... transcription factor (HD-ZIP III) 0.02 OrthoFinder output from all 47 species
Msp_g05334 ICU4, ATHB15,... transcriptional co-regulator *(ZPR) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g26097 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g05442 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g09911 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g22245 PHB-1D, ATHB-14,... HD-ZIP III-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006545 No alias not classified & original description: CDS=1-333 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006549 ICU4, ATHB15,... not classified & original description: CDS=1-489 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0071.g016818 ICU4, ATHB15,... not classified & original description: CDS=1-582 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0103.g019961 PHB-1D, ATHB-14,... component *(uL11) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0123.g021487 No alias not classified & original description: CDS=1-324 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0123.g021492 HB-8, ATHB8, ATHB-8 not classified & original description: CDS=1-1650 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0156.g023644 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sam_g08284 No alias transcriptional co-regulator *(ZPR) & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g08842 No alias transcriptional co-regulator *(ZPR) & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g08843 No alias transcriptional co-regulator *(ZPR) & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g50138 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc08g066500.4.1 ICU4, ATHB15,... transcription factor (HD-ZIP III) 0.01 OrthoFinder output from all 47 species
Zm00001e000073_P001 IFL1, IFL, REV,... transcription factor (HD-ZIP III) 0.02 OrthoFinder output from all 47 species
Zm00001e004553_P004 IFL1, IFL, REV,... transcription factor (HD-ZIP III) 0.01 OrthoFinder output from all 47 species
Zm00001e005034_P001 PHB-1D, ATHB-14,... transcription factor (HD-ZIP III) 0.01 OrthoFinder output from all 47 species
Zm00001e012408_P002 PHB-1D, ATHB-14,... transcription factor (HD-ZIP III) 0.03 OrthoFinder output from all 47 species
Zm00001e018118_P002 PHB-1D, ATHB-14,... transcription factor (HD-ZIP III) 0.02 OrthoFinder output from all 47 species
Zm00001e039093_P002 IFL1, IFL, REV,... transcription factor (HD-ZIP III) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0008289 lipid binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002913 START_lipid-bd_dom 219 375
IPR013978 MEKHLA 661 739
IPR001356 Homeobox_dom 18 76
No external refs found!