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  5. Azfi_s0113.g045978

Azfi_s0113.g045978 (SYT5, NTMC2T2.1,...)


Aliases : SYT5, NTMC2T2.1, SYTE, NTMC2TYPE2.1, ATSYTE

Description : not classified & original description: CDS=169-927


Gene families : OG0000290 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000290_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0113.g045978

Target Alias Description ECC score Gene Family Method Actions
Aev_g05651 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08761.t1 CRK8, Aspi01Gene08761 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cre17.g723700 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g29161 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g01304 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os04g44870.1 LOC_Os04g44870 Elicitor-responsive protein 3 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Ore_g08224 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06166 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g15651 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g55891 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g07399 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g09706 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000491 small nucleolar ribonucleoprotein complex assembly IEP HCCA
BP GO:0000492 box C/D snoRNP assembly IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0007021 tubulin complex assembly IEP HCCA
BP GO:0007023 post-chaperonin tubulin folding pathway IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
MF GO:0048487 beta-tubulin binding IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR000008 C2_dom 4 97
IPR000008 C2_dom 130 222
No external refs found!