1. Home
  2. Species
  3. Equisetum hyemale
  4. Sequence
  5. Ehy_g04044

Ehy_g04044 (HSL1, VAL2, HSI2-L1)


Aliases : HSL1, VAL2, HSI2-L1

Description : LAV-VAL-type transcription factor & original description: none


Gene families : OG0001383 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001383_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g04044

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00082680 HSL1, VAL2,... RNA biosynthesis.transcriptional activation.B3... 0.03 OrthoFinder output from all 47 species
Aob_g12532 HSL1, VAL2, HSI2-L1 LAV-VAL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0007.g011044 HSL1, VAL2, HSI2-L1 LAV-VAL-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.37G034700.1 HSL1, VAL2,... LAV-VAL-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01003212001 HSL1, VAL2, HSI2-L1 RNA biosynthesis.transcriptional activation.B3... 0.02 OrthoFinder output from all 47 species
LOC_Os07g48200.1 HSL1, VAL2,... transcription factor (LAV-VAL) 0.02 OrthoFinder output from all 47 species
Mp7g03700.1 HSL1, VAL2, HSI2-L1 transcription factor (LAV-VAL) 0.02 OrthoFinder output from all 47 species
Ppi_g56252 HSL1, VAL2, HSI2-L1 LAV-VAL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009092 homoserine metabolic process IEP HCCA
BP GO:0019346 transsulfuration IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0050667 homocysteine metabolic process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR011124 Znf_CW 731 773
IPR003340 B3_DNA-bd 461 561
No external refs found!