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  5. Azfi_s0113.g045904

Azfi_s0113.g045904


Description : regulatory component *(RPN11) of 26S proteasome & original description: CDS=139-1068


Gene families : OG0003199 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003199_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0113.g045904

Target Alias Description ECC score Gene Family Method Actions
Aev_g41509 No alias regulatory component *(RPN11) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001542.22 No alias Protein degradation.26S proteasome.regulatory... 0.02 OrthoFinder output from all 47 species
Ore_g05993 No alias regulatory component *(RPN11) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Ore_g19807 No alias regulatory component *(RPN11) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Pnu_g00505 No alias regulatory component *(RPN11) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008233 peptidase activity IEA Interproscan
MF GO:0008237 metallopeptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
BP GO:0006366 transcription by RNA polymerase II IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR000555 JAMM/MPN+_dom 27 138
IPR024969 Rpn11/EIF3F_C 173 295
No external refs found!