1. Home
  2. Species
  3. Azolla filiculoides
  4. Sequence
  5. Azfi_s0112.g045765

Azfi_s0112.g045765 (SNM1, ATSNM1)


Aliases : SNM1, ATSNM1

Description : not classified & original description: CDS=1-1590


Gene families : OG0001699 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001699_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0112.g045765

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00244350 SNM1, ATSNM1,... DNA damage response.DNA repair mechanisms.interstrand... 0.03 OrthoFinder output from all 47 species
Ala_g02014 SNM1, ATSNM1 interstrand crosslink repair factor *(SNM) & original... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021374.33 AtLIG6, LIG6 DNA cross-link repair protein SNM1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Msp_g12976 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g29039 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0033218 amide binding IEP HCCA
MF GO:0120227 acyl-CoA binding IEP HCCA
MF GO:1901567 fatty acid derivative binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR011084 DRMBL 400 504
No external refs found!